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Last updated November 4, 2025

Statutory Compliance in India for Payroll and HR Teams

Logan Jackonis
Logan JackonisHead of Services & Operations, Commenda

Indian employers face monthly, quarterly, and annual statutory deadlines across payroll, tax, labour law, and corporate filings. A single missed Tax Deducted at Source (TDS) or Goods and Services Tax (GST) filing can freeze a company’s bank account or trigger prosecution of the officers in charge. Payroll and HR teams carry that risk every cycle, because most obligations repeat every month and switch on automatically as headcount and turnover grow.

India has more than 100,000 startups recognised by the Department for Promotion of Industry and Internal Trade (DPIIT) and ranks as the world’s third-largest startup ecosystem, per Startup India. Each one inherits the same compliance load. This guide covers payroll deductions, Provident Fund (PF) and Employees’ State Insurance (ESI), TDS, professional tax, gratuity and bonus, minimum wages, the four labour codes, GST, corporate and income tax, Registrar of Companies (ROC) filings, a full deadline calendar, a startup checklist, and penalties.

What Is Statutory Compliance in India?

Statutory compliance in India is adherence to central, state, and local laws that govern employment, payroll, tax, and corporate reporting. It is a legal obligation, not a best practice, and enforcement is audit-driven. For payroll and HR teams it splits into four domains: payroll compliance, tax compliance, labour law compliance, and corporate compliance.

Payroll compliance covers deductions, contributions, and benefits. Tax compliance covers GST, income tax, and TDS. Labour law compliance covers wages, hours, and worker rights. Corporate compliance covers company filings and governance.

Why Does Statutory Compliance Matter for Payroll and HR Teams?

Non-compliance triggers fines, interest, director liability, licence loss, and frozen bank accounts, and Indian enforcement is increasingly audit-driven. A single late PF deposit attracts interest at 12% per annum plus damages, per the Employees’ Provident Fund Organisation (EPFO). Officers “in charge” of a company can be personally prosecuted for many payroll and tax defaults, so officers face personal liability.

The full penalty detail sits in the penalties section below. The point here is simpler: on-time filing is the cheapest form of risk management for a payroll team.

What Are the Payroll Statutory Deductions in India?

Every payroll cycle in India triggers PF, ESI, professional tax, TDS, and, in some states, Labour Welfare Fund (LWF) deductions. Employers also carry side obligations: gratuity accrual, statutory bonus, and leave encashment, the last paid at full-and-final settlement under state Shops and Establishments Acts. The table below sets out the recurring deductions with rates, thresholds, due dates, and sources.

DeductionRateApplicability thresholdMonthly due dateGoverning actSource
Employees’ Provident Fund (EPF)12% employer + 12% employee on basic + Dearness Allowance (DA)20+ employees15th of next monthEPF & MP Act, 1952EPFO
Employees’ State Insurance (ESI)3.25% employer + 0.75% employee10+ employees; wages ≤ ₹21,000/month15th of next monthESI Act, 1948ESIC
Professional taxState slabs, capped at ₹2,500/yearState-specificVaries (often 20th–21st)State PT Acts (Article 276)State commercial tax dept
TDS on salarySlab rate on projected annual salaryAll employers7th of next monthIncome Tax Act, Section 192Income Tax Department
Labour Welfare Fund (LWF)Small fixed employer + employee amountState-specificHalf-yearly or annual (varies)State LWF ActsState labour dept

What Are the PF and ESI Compliance Requirements in India?

PF applies at establishments with 20 or more employees, with 12% employer and 12% employee contributions on basic wages plus DA, per EPFO. ESI applies at 10 or more employees for those earning up to ₹21,000 per month, at 3.25% employer and 0.75% employee, per the Employees’ State Insurance Corporation (ESIC). Both are deposited by the 15th of the following month.

Inside the employer’s 12% PF share, 8.33% goes to the Employees’ Pension Scheme (EPS) on the ₹15,000 wage ceiling (a maximum of ₹1,250/month), and 3.67% goes to EPF. Employers also pay Employees’ Deposit Linked Insurance (EDLI) at 0.5% and administrative charges of 0.5% (minimum ₹500/month), per EPFO. Filing is via monthly Electronic Challan cum Return (ECR), and workers carry a portable Universal Account Number (UAN).

ESI runs on two six-month contribution periods (April–September and October–March) mapped to two benefit periods, per ESIC. The coverage wage ceiling rises to ₹25,000/month for persons with disability. Employees earning up to ₹176 per day are exempt from the employee share, though the employer still contributes.

How Does TDS Deduction and Payment on Salary Work in India?

Employers deduct TDS on salary monthly under Section 192 of the Income Tax Act, based on projected annual salary and the employee’s chosen tax regime, and deposit it by the 7th of the following month (30 April for March deductions), per the Income Tax Department. The new tax regime is the default; employees must opt in for the old regime.

Employers file quarterly returns on Form 24Q and issue Form 16 to employees by 15 June. Late deduction attracts interest at 1% per month and late payment at 1.5% per month. Late filing of the return costs ₹200 per day under Section 234E, per the Income Tax Department.

How Does Professional Tax Compliance Vary by State in India?

Professional tax is a state levy capped at ₹2,500 per person per year under Article 276 of the Constitution. Several states levy it and several do not, so a multi-state employer must register and remit state by state. The table below lists the position in major states.

StateProfessional tax levied?Indicative top slab / frequencySource
MaharashtraYesUp to ₹2,500/year; monthlyMaharashtra GST Dept
KarnatakaYesUp to ₹2,500/year; monthlyKarnataka Commercial Taxes Dept
West BengalYesUp to ₹2,500/year; monthlyWB Directorate of Commercial Taxes
Tamil NaduYesUp to ₹2,500/year; half-yearlyTN local bodies
TelanganaYesUp to ₹2,500/year; monthlyTelangana Commercial Taxes Dept
GujaratYesUp to ₹2,500/year; monthlyGujarat Commercial Tax Dept
DelhiNoNot leviedNCT of Delhi
HaryanaNoNot leviedHaryana Govt
Uttar PradeshNoNot leviedUttar Pradesh Govt
RajasthanNoNot leviedRajasthan Govt

The list changes as states add or drop the levy, so verify each state’s current notification before onboarding staff there.

How Do Gratuity and Statutory Bonus Compliance Work in India?

Gratuity is payable after five years of continuous service at establishments with 10 or more employees, calculated as (last drawn salary × 15/26) × years of service, and is tax-exempt up to ₹20 lakh in aggregate, per the Income Tax Department. Statutory bonus applies at 20 or more employees for those earning up to ₹21,000/month, at 8.33% minimum to 20% maximum, payable within eight months of the financial year close.

ItemRuleSource
Gratuity eligibility5 years’ continuous service; 10+ employee establishmentsPayment of Gratuity Act, 1972
Gratuity formula(Last drawn salary × 15/26) × years of servicePayment of Gratuity Act, 1972
Gratuity tax exemptionUp to ₹20 lakh (aggregate)Income Tax Department
Statutory bonus rate8.33% minimum to 20% maximumPayment of Bonus Act, 1965
Bonus eligibilityWages up to ₹21,000/month; 20+ employeesPayment of Bonus Act, 1965
Bonus calculation ceiling₹7,000/month or minimum wage, whichever is higherPayment of Bonus Act, 1965
Bonus payment deadlineWithin 8 months of financial year (FY) closePayment of Bonus Act, 1965

How Do Employers Stay Compliant With Minimum Wage Notifications?

There is no single national minimum wage in India. Central and state governments notify rates by scheduled employment, skill level, and geographic zone, and revise them (typically twice a year) through Variable Dearness Allowance (VDA) notifications, per the Ministry of Labour & Employment. Employers must track each state’s notifications, not one figure.

Overtime is payable at double the ordinary rate of wages under Section 14 of the Minimum Wages Act, 1948 and Section 59 of the Factories Act, 1948. Working-hour limits, weekly rest days, and shift rules apply alongside, and they vary by state and by establishment type.

What Do the Four Labour Codes Change for Employers in India?

India’s four labour codes came into force on 21 November 2025, per the Ministry of Labour & Employment, consolidating 29 central labour laws. Central rules were issued in draft in December 2025, with finalisation targeted around April 2026, so state Shops and Establishments Acts remain in effect through the transition. The single biggest payroll change is the uniform “wages” definition, which caps excluded allowances at 50% of total remuneration and raises PF and gratuity outgo for many employers.

CodeConsolidatesKey payroll impact
Code on Wages, 2019Minimum Wages Act, Payment of Wages Act, Payment of Bonus Act, Equal Remuneration ActStatutory floor wage; uniform “wages” definition caps excluded allowances at 50% of pay
Industrial Relations Code, 2020Trade Unions Act, Standing Orders Act, Industrial Disputes ActFixed-term employment recognised; revised retrenchment thresholds
Code on Social Security, 2020EPF & MP Act, ESI Act, Gratuity Act, Maternity Benefit ActExtends social security cover to gig and platform workers
Occupational Safety, Health and Working Conditions (OSH) Code, 2020Factories Act, Contract Labour Act, and othersConsolidated registration, working-hour, and safety rules

What GST Filing Compliance Do Businesses in India Need?

GST registration is required at ₹40 lakh turnover for goods and ₹20 lakh for services (₹10 lakh in special category states), per the GST portal. Registered businesses file GSTR-1 for outward supplies and GSTR-3B for summary and payment, plus the annual GSTR-9 and, above ₹5 crore turnover, the GSTR-9C reconciliation.

E-invoicing is mandatory for businesses above ₹5 crore aggregate turnover, per the GST portal. GSTR-1 is generally due on the 11th and GSTR-3B on the 20th of the following month.

What Corporate and Income Tax Compliance Applies Beyond Payroll?

Companies pay advance tax in four instalments (15 June, 15 September, 15 December, and 15 March), file corporate income tax returns, and undergo a tax audit above the Section 44AB thresholds, per the Income Tax Department. They must also collect and deposit Tax Collected at Source (TCS) on specified transactions.

TCS is tax the seller collects from the buyer on certain sales and remits to the government. It follows the same deposit-and-return discipline as TDS, with monthly deposit and quarterly returns.

What Are the Annual ROC Filings Under Corporate Compliance in India?

Every company files AOC-4 for financial statements and MGT-7 for its annual return with the Registrar of Companies through the MCA21 portal run by the Ministry of Corporate Affairs (MCA). Directors complete DIR-3 Know Your Customer (KYC) annually.

Boards must hold the required board meetings and an Annual General Meeting (AGM), and keep updated registers of members and shareholders. All filings are digital through MCA21.

What Does a Statutory Compliance Calendar Look Like for Payroll Teams?

Most payroll statutory deadlines repeat monthly: TDS by the 7th, PF and ESI by the 15th. Quarterly TDS returns and annual filings layer on top. The consolidated calendar below puts the recurring dates in one place; Commenda’s compliance calendar tool tracks these deadlines by entity.

ObligationFrequencyDue datePortalSource
TDS on salary depositMonthly7th (30 April for March)Income tax e-filingIncome Tax Department
PF ECR filingMonthly15th of next monthEPFO Unified PortalEPFO
ESI contributionMonthly15th of next monthESIC portalESIC
Professional taxMonthly (varies)Often 20th–21stState portalState commercial tax dept
GSTR-1Monthly11th of next monthGST portalGSTN
GSTR-3BMonthly20th of next monthGST portalGSTN
TDS return (Form 24Q)QuarterlyMonth-end after quarterIncome tax e-filingIncome Tax Department
Form 16 issuanceAnnual15 JuneIncome tax e-filingIncome Tax Department
Advance taxQuarterly15 Jun/Sep/Dec/MarIncome tax e-filingIncome Tax Department
ROC AOC-4 / MGT-7AnnualAfter AGMMCA21MCA

What Should a Statutory Compliance Checklist for Startups in India Include?

A startup’s obligations switch on by headcount and turnover, so the checklist is threshold-driven. ESI, gratuity, and a Prevention of Sexual Harassment (PoSH) internal committee start at 10 employees; PF and statutory bonus at 20; GST at ₹20 or ₹40 lakh turnover; professional tax on the first hire in a levying state; and ROC filings from incorporation.

TriggerObligation switches onSource
First employee in a levying stateProfessional tax registrationState commercial tax dept
10+ employeesESI registration; gratuity accrual; PoSH committeeESIC / Payment of Gratuity Act
20+ employeesEPF registration; statutory bonusEPFO / Payment of Bonus Act
Turnover ₹20 lakh (services) / ₹40 lakh (goods)GST registrationGSTN
From incorporationROC annual filings; DIR-3 KYCMCA

How Can Employers Avoid Penalties for Non-Compliance in India?

Pay and file on time, because penalties compound through interest, damages, per-day fees, and prosecution for repeat default. The table below sets out the main figures with their statutes and sources. Every one is a documented default a payroll team can eliminate simply by hitting the calendar dates above.

ViolationPenaltyStatuteSource
Late PF depositInterest 12% p.a. + damages 5%–25% p.a. by delayEPF & MP Act, Sec 7Q & 14BEPFO
Late ESI depositInterest 12% p.a. + damagesESI Act & regulationsESIC
Late TDS deductionInterest 1% per monthIncome Tax Act, Sec 201Income Tax Department
Late TDS paymentInterest 1.5% per monthIncome Tax Act, Sec 201Income Tax Department
Late TDS return₹200 per dayIncome Tax Act, Sec 234EIncome Tax Department
Late or no GST registration₹10,000 or 10% of tax due, whichever is higherCGST Act, Sec 122GSTN
GST evasionUp to 100% of tax dueCGST Act, Sec 122GSTN
GST invoice failure₹50 per dayCGST ActGSTN

How Commenda Helps With Statutory Compliance in India

Compliance certainty comes from tracking every filing, deadline, and threshold in one place instead of across spreadsheets and calendar reminders. Commenda’s entity management platform runs managed India entities with every MCA, PF, ESI, and payroll filing tracked and handled, and Commenda incorporation stands up new India entities from scratch. For GST registration and return filing, Commenda’s global indirect tax software keeps registrations current and returns filed on time.

Pair that with Commenda’s compliance calendar to keep every monthly PF, ESI, TDS, and GST deadline visible by entity. Book a demo to get a compliance gap assessment for your India entity.

About the author

Logan Jackonis

Logan Jackonis

Head of Services & Operations, Commenda

Logan leads Commenda’s Services and Operations team, helping controllers, heads of tax, and finance leaders navigate international expansion. He built a global expert network across 70 countries and previously worked in management consulting across the Middle East and Southeast Asia.

Disclaimer: Commenda and its affiliates do not provide tax, accounting, or legal advice. This material has been prepared for informational purposes only, and is not intended to provide or be relied on for tax, accounting, or legal advice. You should consult your own tax, accounting, and legal advisors before engaging in any related activities or transactions.

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